181 lines
5.9 KiB
JSON
181 lines
5.9 KiB
JSON
{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "schema:BioChemEntity",
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"title": "BioChemEntity",
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"description": "Any biological, chemical, or biochemical thing. For example: a protein; a gene; a chemical; a synthetic chemical.",
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"type": "object",
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"allOf": [
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{ "description": "The most generic type of item.", "$ref": "schema:Thing" }
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],
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"properties": {
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"associatedDisease": {
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"description": "Disease associated to this BioChemEntity. Such disease can be a MedicalCondition or a URL. If you want to add an evidence supporting the association, please use PropertyValue.",
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"oneOf": [
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{
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:MedicalCondition" },
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{ "$ref": "schema:PropertyValue" }
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]
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},
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{
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"type": "array",
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"items": {
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:MedicalCondition" },
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{ "$ref": "schema:PropertyValue" }
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]
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}
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}
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]
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},
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"bioChemInteraction": {
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"description": "A BioChemEntity that is known to interact with this item.",
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"oneOf": [
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{ "$ref": "schema:BioChemEntity" },
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{ "type": "array", "items": { "$ref": "schema:BioChemEntity" } }
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]
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},
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"bioChemSimilarity": {
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"description": "A similar BioChemEntity, e.g., obtained by fingerprint similarity algorithms.",
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"oneOf": [
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{ "$ref": "schema:BioChemEntity" },
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{ "type": "array", "items": { "$ref": "schema:BioChemEntity" } }
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]
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},
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"biologicalRole": {
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"description": "A role played by the BioChemEntity within a biological context.",
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"oneOf": [
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{ "$ref": "schema:DefinedTerm" },
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{ "type": "array", "items": { "$ref": "schema:DefinedTerm" } }
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]
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},
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"funding": {
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"description": "A [[Grant]] that directly or indirectly provide funding or sponsorship for this item. See also [[ownershipFundingInfo]].",
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"oneOf": [
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{ "$ref": "schema:Grant" },
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{ "type": "array", "items": { "$ref": "schema:Grant" } }
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]
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},
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"hasBioChemEntityPart": {
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"description": "Indicates a BioChemEntity that (in some sense) has this BioChemEntity as a part. ",
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"oneOf": [
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{ "$ref": "schema:BioChemEntity" },
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{ "type": "array", "items": { "$ref": "schema:BioChemEntity" } }
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]
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},
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"hasMolecularFunction": {
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"description": "Molecular function performed by this BioChemEntity; please use PropertyValue if you want to include any evidence.",
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"oneOf": [
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{
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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},
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{
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"type": "array",
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"items": {
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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}
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}
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]
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},
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"hasRepresentation": {
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"description": "A common representation such as a protein sequence or chemical structure for this entity. For images use schema.org/image.",
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"oneOf": [
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{
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "type": "string" },
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{ "$ref": "schema:PropertyValue" }
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]
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},
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{
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"type": "array",
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"items": {
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "type": "string" },
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{ "$ref": "schema:PropertyValue" }
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]
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}
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}
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]
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},
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"isEncodedByBioChemEntity": {
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"description": "Another BioChemEntity encoding by this one.",
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"oneOf": [
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{ "$ref": "schema:Gene" },
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{ "type": "array", "items": { "$ref": "schema:Gene" } }
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]
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},
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"isInvolvedInBiologicalProcess": {
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"description": "Biological process this BioChemEntity is involved in; please use PropertyValue if you want to include any evidence.",
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"oneOf": [
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{
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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},
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{
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"type": "array",
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"items": {
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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}
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}
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]
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},
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"isLocatedInSubcellularLocation": {
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"description": "Subcellular location where this BioChemEntity is located; please use PropertyValue if you want to include any evidence.",
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"oneOf": [
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{
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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},
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{
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"type": "array",
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"items": {
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:PropertyValue" }
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]
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}
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}
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]
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},
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"isPartOfBioChemEntity": {
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"description": "Indicates a BioChemEntity that is (in some sense) a part of this BioChemEntity. ",
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"oneOf": [
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{ "$ref": "schema:BioChemEntity" },
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{ "type": "array", "items": { "$ref": "schema:BioChemEntity" } }
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]
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},
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"taxonomicRange": {
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"description": "The taxonomic grouping of the organism that expresses, encodes, or in some way related to the BioChemEntity.",
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"anyOf": [
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{ "type": "string", "format": "uri" },
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{ "type": "string" },
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{ "$ref": "schema:DefinedTerm" },
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{ "$ref": "schema:Taxon" }
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]
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}
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}
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}
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